This is the Linux app named ARDEN to run in Linux online whose latest release can be downloaded as ARDEN.zip. It can be run online in the free hosting provider OnWorks for workstations.
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ARDEN to run in Linux online
DESCRIPTION:
We introduce ARDEN (Artificial Reference Driven Estimation of false positives in NGS data), a novel benchmark that estimates error rates based on real experimental reads and an additionally generated artificial reference genome. It allows the computation of error rates specifically for a dataset and the construction of a ROC-curve. Thereby, it can be used to optimize parameters for read mappers, to select read mappers for a specific problem or also to filter alignments based on quality estimation.User interface
Command-line
Programming Language
Python
This is an application that can also be fetched from https://sourceforge.net/projects/arden/. It has been hosted in OnWorks in order to be run online in an easiest way from one of our free Operative Systems.