BIGSdb download for Linux

This is the Linux app named BIGSdb whose latest release can be downloaded as bigsdb_1.24.1.tar.gz. It can be run online in the free hosting provider OnWorks for workstations.

 
 

Download and run online this app named BIGSdb with OnWorks for free.

Follow these instructions in order to run this app:

- 1. Downloaded this application in your PC.

- 2. Enter in our file manager https://www.onworks.net/myfiles.php?username=XXXXX with the username that you want.

- 3. Upload this application in such filemanager.

- 4. Start the OnWorks Linux online or Windows online emulator or MACOS online emulator from this website.

- 5. From the OnWorks Linux OS you have just started, goto our file manager https://www.onworks.net/myfiles.php?username=XXXXX with the username that you want.

- 6. Download the application, install it and run it.

SCREENSHOTS:


BIGSdb


DESCRIPTION:

The Bacterial Isolate Genome Sequence Database (BIGSdb) is a scalable, web-accessible database system designed to store and analyse linked phenotypic and genotypic information in a computationally efficient manner. Sequence data can range from single sequence reads to multiple contigs generated by whole genome sequencing technologies. The system incorporates the capacity to define and identify any number of loci and genetic variants at those loci within the stored nucleotide sequences. These loci can be further organised into schemes for isolate characterisation or for evolutionary or functional analyses.

See Jolley and Maiden 2010, BMC Bioinformatics 11:595 (http://www.biomedcentral.com/1471-2105/11/595).

You can report bugs or make enhancement requests using the issues tracker at https://github.com/kjolley/BIGSdb. The source code is also mirrored there.

Audience

Science/Research, Advanced End Users, Developers


User interface

Web-based


Programming Language

Perl, JavaScript


Database Environment

PostgreSQL (pgsql)


This is an application that can also be fetched from https://sourceforge.net/projects/bigsdb/. It has been hosted in OnWorks in order to be run online in an easiest way from one of our free Operative Systems.



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