This is the Linux app named OptFlux whose latest release can be downloaded as OptFlux-3.4.0-windows-x64-installer.exe. It can be run online in the free hosting provider OnWorks for workstations.
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OptFlux
DESCRIPTION:
OptFlux is an open-source and modular software aimed at being the reference computational application in the field. It is the first tool to incorporate strain optimization tasks, i.e., the identification of Metabolic Engineering targets.
Features
- SBML compatible (import/export)
- CellDesigner layouts compatible (import/export) - add simulation values
- Metatool compatible (import/export)
- Flat Files compatible (import/export)
- Phenotype simulation - FBA / MOMA / ROOM / MFA
- Flux Variability Analysis (FVA)
- Elementary Modes Analysis (EMA / EFMs)
- Bi-level Optimization (OptGene / OptKnock)
- Multiobjective Optimization
- Simulation/Optimization with Gene-Protein-Reaction (GPR) information
- Regulatory Network Simulation / Optimization
- Visualization of CellDesigner Layouts (Biovisualizer)
Audience
Science/Research, End Users/Desktop, Engineering
User interface
Java Swing
Programming Language
Java
Categories
This is an application that can also be fetched from https://sourceforge.net/projects/optflux/. It has been hosted in OnWorks in order to be run online in an easiest way from one of our free Operative Systems.