This is the Windows app named SpiKeDeteKt to run in Windows online over Linux online whose latest release can be downloaded as SpikeDetekt0.1.2.tar.gz. It can be run online in the free hosting provider OnWorks for workstations.
Download and run online this app named SpiKeDeteKt to run in Windows online over Linux online with OnWorks for free.
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- 6. Download the application and install it.
- 7. Download Wine from your Linux distributions software repositories. Once installed, you can then double-click the app to run them with Wine. You can also try PlayOnLinux, a fancy interface over Wine that will help you install popular Windows programs and games.
Wine is a way to run Windows software on Linux, but with no Windows required. Wine is an open-source Windows compatibility layer that can run Windows programs directly on any Linux desktop. Essentially, Wine is trying to re-implement enough of Windows from scratch so that it can run all those Windows applications without actually needing Windows.
SpiKeDeteKt to run in Windows online over Linux online
DESCRIPTION:
This is an automatic spike detection program which takes account of probe geometry and produces a .mask file to be used with the new masked version of KlustaKwik.We recommend you use Python 2.6 or 2.7, e.g. a free academic version can be obtained from Entthought Python.
The input files for SpiKeDeteKt are:
.dat (raw data file)
.probe (probe file, described below - user constructed)
parameters.py (optional - otherwise it uses defaultparameters.py)
SpiKeDeteKt outputs the following files:
.fet.n (feature file)
.mask.n (needed for using the new (masked) KlustaKwik)
.clu.n (a trivial clue file where everything is put into a single cluster)
.fmask.n (trial - float masks instead of binary, we are using this for testing masked KlustaKwik)
.spk.n (spike file)
.upsk.n (unfiltered spike waveform)
.res.n (list of spike times)
.xml (an xml file with all the parameters that can subsequently be used by neuroscope or klusters)
.fil (highpass filtered data)
.h5 (
Audience
Science/Research
Programming Language
Python
This is an application that can also be fetched from https://sourceforge.net/projects/spikedetekt/. It has been hosted in OnWorks in order to be run online in an easiest way from one of our free Operative Systems.