This is the command cmtk-mk_nifti_hdr that can be run in the OnWorks free hosting provider using one of our multiple free online workstations such as Ubuntu Online, Fedora Online, Windows online emulator or MAC OS online emulator
PROGRAM:
NAME
mk_nifti_hdr - Make NIFTI header file
SYNOPSIS
mk_nifti_hdr [options] [output.nii]
DESCRIPTION
Make header file according to NIFTI file format based on user-supplied parameters for
geometry, data type, orientation, etc.
OPTIONS
Global Toolkit Options (these are shared by all CMTK tools)
--help
Write list of basic command line options to standard output.
--help-all
Write complete list of basic and advanced command line options to standard output.
--wiki
Write list of command line options to standard output in MediaWiki markup.
--man
Write man page source in 'nroff' markup to standard output.
--version
Write toolkit version to standard output.
--echo
Write the current command line to standard output.
--verbose-level <integer>
Set verbosity level.
--verbose, -v
Increment verbosity level by 1 (deprecated; supported for backward compatibility).
--threads <integer>
Set maximum number of parallel threads (for POSIX threads and OpenMP).
Main Options
--dims <string>, -D <string>
Set dimensions in voxels. Provided as 'DimsX,DimsY,DimsZ'
--voxel <string>, -V <string>
Set voxel size. Provided as 'PixX,PixY,PixZ' [in mm]
--offset <float>, -O <float>
Binary data file offset [Default: disabled]
--byte, -b
8 bits, unsigned (this is the default)
--char, -c
8 bits, signed
--short, -s
16 bits, signed
--ushort, -u
16 bits, unsigned
--int, -i
32 bits signed
--float, -f
32 bits floating point
--double, -d
64 bits floating point
--reset-coordinates
In an imported header, reset the image-to-physical coordinate mapping to an identity
matrix.
--attached
Create attached header for use in single-file images. Image data must be concatenated
directly onto the created header file.
--import <string>, -I <string>
Import data from given header file. [Default: NONE]
--description <string>
Set description string [max. 80 characters] [Default: NONE]
AUTHORS
Torsten Rohlfing, with contributions from Michael P. Hasak, Greg Jefferis, Calvin R.
Maurer, Daniel B. Russakoff, and Yaroslav Halchenko
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