This is the Linux app named pHMM4weka whose latest release can be downloaded as phmm4weka.jar. It can be run online in the free hosting provider OnWorks for workstations.
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This Java software implements Profile Hidden Markov Models (PHMMs) for protein classification for the WEKA workbench. Standard PHMMs and newly introduced binary PHMMs are used. In addition the software allows propositionalisation of PHMMs.
- profile hidden markov models
This is an application that can also be fetched from https://sourceforge.net/projects/phmm4weka/. It has been hosted in OnWorks in order to be run online in an easiest way from one of our free Operative Systems.