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Pop-seq

Free download Pop-seq Linux app to run online in Ubuntu online, Fedora online or Debian online

This is the Linux app named Pop-seq whose latest release can be downloaded as popseq.tar.gz. It can be run online in the free hosting provider OnWorks for workstations.

Download and run online this app named Pop-seq with OnWorks for free.

Follow these instructions in order to run this app:

- 1. Downloaded this application in your PC.

- 2. Enter in our file manager https://www.onworks.net/myfiles.php?username=XXXXX with the username that you want.

- 3. Upload this application in such filemanager.

- 4. Start the OnWorks Linux online or Windows online emulator or MACOS online emulator from this website.

- 5. From the OnWorks Linux OS you have just started, goto our file manager https://www.onworks.net/myfiles.php?username=XXXXX with the username that you want.

- 6. Download the application, install it and run it.

Pop-seq


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DESCRIPTION

Pop-seq is a perl based simulation tool, for generating any kind of mapping population using an user defined recombination landscapes. Combined with the Seq-sim tool you can generate pooled or bar-coded next generation sequencing biased outcomes. This tool were used to solve reappearing question in a experimental design (e. g. of how many plants or sequencing depth is advisable in a back crossed or out crossed scenario )



Audience

Science/Research


User interface

Command-line


Programming Language

Perl, S/R


Categories

Bio-Informatics

This is an application that can also be fetched from https://sourceforge.net/projects/popseq/. It has been hosted in OnWorks in order to be run online in an easiest way from one of our free Operative Systems.


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