This is the Linux app named scalpel whose latest release can be downloaded as scalpel-0.5.4.tar.gz. It can be run online in the free hosting provider OnWorks for workstations.
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DESCRIPTIONBioinformatics pipeline for discovery of genetic variants from NGS reads.
- Support Illumina reads
- Detect mutations in one exome
- Detect denovo mutation in one family
- Detect somatic mutations in tumor/normal pair
This is an application that can also be fetched from https://sourceforge.net/projects/scalpel/. It has been hosted in OnWorks in order to be run online in an easiest way from one of our free Operative Systems.