This is the Linux app named GIIRA whose latest release can be downloaded as GIIRA_01_3.zip. It can be run online in the free hosting provider OnWorks for workstations.
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GIIRA
DESCRIPTION:
GIIRA is a gene prediction method that identifies potential coding regions exclusively based on the mapping of reads from an RNA-Seq experiment.It was foremost designed for prokaryotic gene prediction and is able to resolve genes within the expressed region of an operon. However, it is also applicable to eukaryotes and predicts exon intron structures as well as alternative isoforms.
This is an application that can also be fetched from https://sourceforge.net/projects/giira/. It has been hosted in OnWorks in order to be run online in an easiest way from one of our free Operative Systems.