This is the command bp_tree2pagp that can be run in the OnWorks free hosting provider using one of our multiple free online workstations such as Ubuntu Online, Fedora Online, Windows online emulator or MAC OS online emulator
PROGRAM:
NAME
bp_tree2pag - convert Bio::TreeIO parseable format trees to pagel format
SYNOPSIS
bp_tree2pag -if nexus -i file.nexus > file.pag
# OR pipe in through STDIN, and use newick format instead
cat file.newick | bp_tree2pag -if newick > file.nh
# OR specify an output and input
bp_tree2pag -o file.pag -i file.newick
DESCRIPTION
Convert TreeIO parseable files into Pagel format tree files. Be warned that pagel format
only really supports a single tree per file so. Also Pagel parsing is not yet available
in bioperl.
Use bp_tree2pagp online using onworks.net services