newcoilse - Online in the Cloud

This is the command newcoilse that can be run in the OnWorks free hosting provider using one of our multiple free online workstations such as Ubuntu Online, Fedora Online, Windows online emulator or MAC OS online emulator

PROGRAM:

NAME


newcoils - Predicts coils protein secondary structure

SYNOPSIS


newcoils -sequence seqall -datafile datafile -window integer -weighted integer
-verb integer -mode integer -minseg integer -minp float -outfile outfile

newcoils -help

DESCRIPTION


newcoils is a command line program from EMBOSS (“the European Molecular Biology Open
Software Suite”). It is part of the "Protein:2D Structure" command group(s).

OPTIONS


Input section
-sequence seqall

-datafile datafile
Default value: Enewcoils.mat

Required section
-window integer
Default value: 21

-weighted integer

-verb integer

-mode integer

-minseg integer
Default value: 1

-minp float
Default value: 0.50

Output section
-outfile outfile

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