This is the Windows app named iPiG to run in Windows online over Linux online whose latest release can be downloaded as ipig_r5.zip. It can be run online in the free hosting provider OnWorks for workstations.
Download and run online this app named iPiG to run in Windows online over Linux online with OnWorks for free.
Follow these instructions in order to run this app:
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- 6. Download the application and install it.
- 7. Download Wine from your Linux distributions software repositories. Once installed, you can then double-click the app to run them with Wine. You can also try PlayOnLinux, a fancy interface over Wine that will help you install popular Windows programs and games.
Wine is a way to run Windows software on Linux, but with no Windows required. Wine is an open-source Windows compatibility layer that can run Windows programs directly on any Linux desktop. Essentially, Wine is trying to re-implement enough of Windows from scratch so that it can run all those Windows applications without actually needing Windows.
SCREENSHOTS:
iPiG to run in Windows online over Linux online
DESCRIPTION:
iPiG targets the integration of peptide spectrum matches (PSMs) from mass spectrometry (MS)peptide identifications into genomic visualisations provided by genome browser such as the UCSC genome browser (http://genome.ucsc.edu/).
iPiG takes PSMs from the MS standard format mzIdentML (*.mzid) or in text format and provides results in genome track formats (BED and GFF3 files), which can be easily imported into genome browsers.
For more details about iPiG and it's functionallity, please see
"iPiG: Integrating Peptide Spectrum Matches Into Genome Browser Visualizations"
Mathias Kuhring and Bernhard Y. Renard
(http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.pone.0050246)
Audience
Science/Research
User interface
Java Swing, Console/Terminal
Programming Language
Java
This is an application that can also be fetched from https://sourceforge.net/projects/ipig/. It has been hosted in OnWorks in order to be run online in an easiest way from one of our free Operative Systems.