This is the command bp_aacompp that can be run in the OnWorks free hosting provider using one of our multiple free online workstations such as Ubuntu Online, Fedora Online, Windows online emulator or MAC OS online emulator
PROGRAM:
NAME
bp_aacomp - amino acid composition of protein sequences
SYNOPSIS
bp_aacomp [-f/--format FORMAT] [-h/--help] filename
or
bp_aacomp [-f/--format FORMAT] < filename
or
bp_aacomp [-f/--format FORMAT] -i filename
DESCRIPTION
This scripts prints out the count of amino acids over all protein sequences from the input
file.
OPTIONS
The default sequence format is fasta.
The sequence input can be provided using any of the three methods:
unnamed argument
bp_aacomp filename
named argument
bp_aacomp -i filename
standard input
bp_aacomp < filename
FEEDBACK
Mailing Lists
User feedback is an integral part of the evolution of this and other Bioperl modules. Send
your comments and suggestions preferably to the Bioperl mailing list. Your participation
is much appreciated.
bioperl-l@bioperl.org - General discussion
http://bioperl.org/wiki/Mailing_lists - About the mailing lists
Reporting Bugs
Report bugs to the Bioperl bug tracking system to help us keep track of the bugs and their
resolution. Bug reports can be submitted via the web:
https://github.com/bioperl/bioperl-live/issues
AUTHOR - Jason Stajich
Email jason@bioperl.org
HISTORY
Based on aacomp.c from an old version of EMBOSS
Use bp_aacompp online using onworks.net services
