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bp_aacompp - Online in the Cloud

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This is the command bp_aacompp that can be run in the OnWorks free hosting provider using one of our multiple free online workstations such as Ubuntu Online, Fedora Online, Windows online emulator or MAC OS online emulator

PROGRAM:

NAME


bp_aacomp - amino acid composition of protein sequences

SYNOPSIS


bp_aacomp [-f/--format FORMAT] [-h/--help] filename
or
bp_aacomp [-f/--format FORMAT] < filename
or
bp_aacomp [-f/--format FORMAT] -i filename

DESCRIPTION


This scripts prints out the count of amino acids over all protein sequences from the input
file.

OPTIONS


The default sequence format is fasta.

The sequence input can be provided using any of the three methods:

unnamed argument
bp_aacomp filename

named argument
bp_aacomp -i filename

standard input
bp_aacomp < filename

FEEDBACK


Mailing Lists
User feedback is an integral part of the evolution of this and other Bioperl modules. Send
your comments and suggestions preferably to the Bioperl mailing list. Your participation
is much appreciated.

[email protected] - General discussion
http://bioperl.org/wiki/Mailing_lists - About the mailing lists

Reporting Bugs
Report bugs to the Bioperl bug tracking system to help us keep track of the bugs and their
resolution. Bug reports can be submitted via the web:

https://github.com/bioperl/bioperl-live/issues

AUTHOR - Jason Stajich


Email [email protected]

HISTORY


Based on aacomp.c from an old version of EMBOSS

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