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PROGRAM:

NAME


bp_parse_hmmsearch - parse single/multiple HMMSEARCH results file(s) with
different output options

SYNOPSIS


bp_parse_hmmsearch [--po] [--ps] -s hmmsearch_file

bp_parse_hmmsearch [--po] [--ps] -m index_file

DESCRIPTION


Mandatory Options:
-s HMMSEARCH file to parse.
-m INDEX file that contains a list of HMMSEARCH files for multiple
parsing.

Special Options:
--po Print only the hits that have positive scores.
--ps Print the total of positive scores found.
--help Show this documentation.

FEEDBACK


Mailing Lists
User feedback is an integral part of the evolution of this and other Bioperl modules. Send
your comments and suggestions preferably to the Bioperl mailing list. Your participation
is much appreciated.

[email protected] - General discussion
http://bioperl.org/wiki/Mailing_lists - About the mailing lists

Reporting Bugs
Report bugs to the Bioperl bug tracking system to help us keep track of the bugs and their
resolution. Bug reports can be submitted via the web:

https://github.com/bioperl/bioperl-live/issues

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