This is the command bp_parse_hmmsearchp that can be run in the OnWorks free hosting provider using one of our multiple free online workstations such as Ubuntu Online, Fedora Online, Windows online emulator or MAC OS online emulator
PROGRAM:
NAME
bp_parse_hmmsearch - parse single/multiple HMMSEARCH results file(s) with
different output options
SYNOPSIS
bp_parse_hmmsearch [--po] [--ps] -s hmmsearch_file
bp_parse_hmmsearch [--po] [--ps] -m index_file
DESCRIPTION
Mandatory Options:
-s HMMSEARCH file to parse.
-m INDEX file that contains a list of HMMSEARCH files for multiple
parsing.
Special Options:
--po Print only the hits that have positive scores.
--ps Print the total of positive scores found.
--help Show this documentation.
FEEDBACK
Mailing Lists
User feedback is an integral part of the evolution of this and other Bioperl modules. Send
your comments and suggestions preferably to the Bioperl mailing list. Your participation
is much appreciated.
bioperl-l@bioperl.org - General discussion
http://bioperl.org/wiki/Mailing_lists - About the mailing lists
Reporting Bugs
Report bugs to the Bioperl bug tracking system to help us keep track of the bugs and their
resolution. Bug reports can be submitted via the web:
https://github.com/bioperl/bioperl-live/issues
Use bp_parse_hmmsearchp online using onworks.net services
