EnglishFrenchSpanish

Ad


OnWorks favicon

bp_search2BSMLp - Online in the Cloud

Run bp_search2BSMLp in OnWorks free hosting provider over Ubuntu Online, Fedora Online, Windows online emulator or MAC OS online emulator

This is the command bp_search2BSMLp that can be run in the OnWorks free hosting provider using one of our multiple free online workstations such as Ubuntu Online, Fedora Online, Windows online emulator or MAC OS online emulator

PROGRAM:

NAME


search2bsml - Turn SearchIO parseable reports(s) into a BSML report

SYNOPSIS


Usage:
search2bsml [-o outputfile] [-f reportformat] [-i inputfilename] OR file1 file2 ..

DESCRIPTION


This script will turn a protein Search report (BLASTP, FASTP, SSEARCH, AXT, WABA, SIM4)
into a BSML File.

The options are:

-i infilename - (optional) inputfilename, will read
either ARGV files or from STDIN
-o filename - the output filename [default STDOUT]
-f format - search result format (blast, fasta,waba,axt)
(ssearch is fasta format). default is blast.
-h - this help menu

Additionally specify the filenames you want to process on the command-line. If no files
are specified then STDIN input is assumed. You specify this by doing: search2gff < file1
file2 file3

Use bp_search2BSMLp online using onworks.net services


Free Servers & Workstations

Download Windows & Linux apps

Linux commands

  • 1
    abidw
    abidw
    abidw - serialize the ABI of an ELF
    file abidw reads a shared library in ELF
    format and emits an XML representation
    of its ABI to standard output. The
    emitted ...
    Run abidw
  • 2
    abilint
    abilint
    abilint - validate an abigail ABI
    representation abilint parses the native
    XML representation of an ABI as emitted
    by abidw. Once it has parsed the XML
    represe...
    Run abilint
  • 3
    createhdf
    createhdf
    createhdf Create a blank IDE hard
    disk image inhdf format ...
    Run createhdf
  • 4
    CreateInterface
    CreateInterface
    CreateInterface Create a Java
    Interface definition from DBus
    introspection data. ...
    Run CreateInterface
  • 5
    gba3
    gba3
    gba3 - GAMBAS Archiver ...
    Run gba3
  • 6
    gbackground
    gbackground
    gbackground - interval-based gnome
    background changer SYNTAX: gbackground
    DESCRIPTION: This program allows to
    change periodically the gnome background
    in inter...
    Run gbackground
  • More »

Ad