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fastaq-enumerate_names - Online in the Cloud

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This is the command fastaq-enumerate_names that can be run in the OnWorks free hosting provider using one of our multiple free online workstations such as Ubuntu Online, Fedora Online, Windows online emulator or MAC OS online emulator

PROGRAM:

NAME


fastaq_enumerate_names - Renames sequences in a file, calling them 1,2,3... etc

DESCRIPTION


usage: fastaq_enumerate_names [options] <infile> <outfile>

Renames sequences in a file, calling them 1,2,3... etc

positional arguments:
infile Name of fasta/q file to be read

outfile
Name of output fasta/q file

optional arguments:
-h, --help
show this help message and exit

--start_index START_INDEX
Starting number [1]

--rename_file RENAME_FILE
If used, will write a file of old name to new name

--keep_suffix
Use this to keep a /1 or /2 suffix at the end of each name

--suffix SUFFIX
Add the given string to the end of every name

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