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forge - Online in the Cloud

Run forge in OnWorks free hosting provider over Ubuntu Online, Fedora Online, Windows online emulator or MAC OS online emulator

This is the command forge that can be run in the OnWorks free hosting provider using one of our multiple free online workstations such as Ubuntu Online, Fedora Online, Windows online emulator or MAC OS online emulator

PROGRAM:

NAME


forge - training program for SNAP

SYNOPSIS


forge [options] <ann> <dna> [options]

OPTIONS


-help

-verbose

-pseudocount <float>
[1] (absolute number for all models)

-pseudoCoding <float> [0.0] (eg. 0.05)

-pseudoIntron <float> [0.0]

-pseudoInter <float>
[0.0]

-min-counts
[0]

-lcmask [-fragmentN]

-utr5-length <int>
[50]

-utr5-offset <int>
[10]

-utr3-length <int>
[50]

-utr3-offset <int>
[10]

-explicit <int>
[250]

-min-intron <int>
[30]

-boost <file>
(file of ID <int>)

Use forge online using onworks.net services


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