This is the command gdcmtar that can be run in the OnWorks free hosting provider using one of our multiple free online workstations such as Ubuntu Online, Fedora Online, Windows online emulator or MAC OS online emulator
PROGRAM:
NAME
gdcmtar - Concatenate/Extract DICOM files.
SYNOPSIS
gdcmtar [options] file-in file-out
DESCRIPTION
The gdcmtar is a command line tool used to tar/untar multi-frames images (including
SIEMENS MOSAIC file)
PARAMETERS
file-in DICOM input filename
file-out DICOM output filename
OPTIONS
specific options
--enhance enhance (default)
-U --unenhance unenhance
-M --mosaic Split SIEMENS Mosaic image into multiple frames.
-p --pattern Specify trailing file pattern.
--root-uid Root UID.
general options
-h --help
print this help text and exit
-v --version
print version information and exit
-V --verbose
verbose mode (warning+error).
-W --warning
warning mode, print warning information
-E --error
error mode, print error information
-D --debug
debug mode, print debug information
environment variable
GDCM_ROOT_UID Root UID
TYPICAL USAGE
SIEMENS Mosaic
$ gdcminfo MR-sonata-3D-as-Tile.dcm
MediaStorage is 1.2.840.10008.5.1.4.1.1.4 [MR Image Storage]
TransferSyntax is 1.2.840.10008.1.2.1 [Explicit VR Little Endian]
NumberOfDimensions: 2
Dimensions: (384,384,1)
\&...
$ gdcmtar --mosaic -i MR-sonata-3D-as-Tile.dcm -o mosaic --pattern %03d.dcm
Will output:
-rw-r--r-- 1 mathieu mathieu 72882 2009-08-10 11:14 mosaic000.dcm
-rw-r--r-- 1 mathieu mathieu 72886 2009-08-10 11:14 mosaic001.dcm
-rw-r--r-- 1 mathieu mathieu 72886 2009-08-10 11:14 mosaic002.dcm
-rw-r--r-- 1 mathieu mathieu 72886 2009-08-10 11:14 mosaic003.dcm
-rw-r--r-- 1 mathieu mathieu 72886 2009-08-10 11:14 mosaic004.dcm
-rw-r--r-- 1 mathieu mathieu 72886 2009-08-10 11:14 mosaic005.dcm
-rw-r--r-- 1 mathieu mathieu 72884 2009-08-10 11:14 mosaic006.dcm
-rw-r--r-- 1 mathieu mathieu 72882 2009-08-10 11:14 mosaic007.dcm
-rw-r--r-- 1 mathieu mathieu 72884 2009-08-10 11:14 mosaic008.dcm
-rw-r--r-- 1 mathieu mathieu 72884 2009-08-10 11:14 mosaic009.dcm
-rw-r--r-- 1 mathieu mathieu 72884 2009-08-10 11:14 mosaic010.dcm
-rw-r--r-- 1 mathieu mathieu 72884 2009-08-10 11:14 mosaic011.dcm
-rw-r--r-- 1 mathieu mathieu 72884 2009-08-10 11:14 mosaic012.dcm
-rw-r--r-- 1 mathieu mathieu 72884 2009-08-10 11:14 mosaic013.dcm
-rw-r--r-- 1 mathieu mathieu 72882 2009-08-10 11:14 mosaic014.dcm
-rw-r--r-- 1 mathieu mathieu 72884 2009-08-10 11:14 mosaic015.dcm
-rw-r--r-- 1 mathieu mathieu 72882 2009-08-10 11:14 mosaic016.dcm
-rw-r--r-- 1 mathieu mathieu 72884 2009-08-10 11:14 mosaic017.dcm
-rw-r--r-- 1 mathieu mathieu 72884 2009-08-10 11:14 mosaic018.dcm
-rw-r--r-- 1 mathieu mathieu 72884 2009-08-10 11:14 mosaic019.dcm
-rw-r--r-- 1 mathieu mathieu 72884 2009-08-10 11:14 mosaic020.dcm
-rw-r--r-- 1 mathieu mathieu 72884 2009-08-10 11:14 mosaic021.dcm
-rw-r--r-- 1 mathieu mathieu 72884 2009-08-10 11:14 mosaic022.dcm
-rw-r--r-- 1 mathieu mathieu 72884 2009-08-10 11:14 mosaic023.dcm
-rw-r--r-- 1 mathieu mathieu 72884 2009-08-10 11:14 mosaic024.dcm
-rw-r--r-- 1 mathieu mathieu 72884 2009-08-10 11:14 mosaic025.dcm
-rw-r--r-- 1 mathieu mathieu 72884 2009-08-10 11:14 mosaic026.dcm
-rw-r--r-- 1 mathieu mathieu 72884 2009-08-10 11:14 mosaic027.dcm
-rw-r--r-- 1 mathieu mathieu 72884 2009-08-10 11:14 mosaic028.dcm
-rw-r--r-- 1 mathieu mathieu 72884 2009-08-10 11:14 mosaic029.dcm
-rw-r--r-- 1 mathieu mathieu 72882 2009-08-10 11:14 mosaic030.dcm
$ gdcminfo mosaic000.dcm
MediaStorage is 1.2.840.10008.5.1.4.1.1.4 [MR Image Storage]
TransferSyntax is 1.2.840.10008.1.2.1 [Explicit VR Little Endian]
NumberOfDimensions: 2
Dimensions: (64,64,1)
\&...
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