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gt-readjoiner-overlap - Online in the Cloud

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This is the command gt-readjoiner-overlap that can be run in the OnWorks free hosting provider using one of our multiple free online workstations such as Ubuntu Online, Fedora Online, Windows online emulator or MAC OS online emulator

PROGRAM:

NAME


gt-readjoiner-overlap - Compute suffix prefix matches from encoded sequence.

SYNOPSIS


gt readjoiner overlap [option ...] [file]

DESCRIPTION


-readset [string]
specify the readset name (default: undefined)

-l [value]
specify the minimum SPM length (default: 0)

-parts [value]
specify the number of parts (default: 0)

-memlimit [string]
specify maximal amount of memory to be used during index construction (in bytes, the
keywords MB and GB are allowed) (default: undefined)

-v [yes|no]
be verbose (default: no)

-q [yes|no]
suppress standard output messages (default: no)

-help
display help and exit

-version
display version information and exit

REPORTING BUGS


Report bugs to <[email protected]>.

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