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showorfe - Online in the Cloud

Run showorfe in OnWorks free hosting provider over Ubuntu Online, Fedora Online, Windows online emulator or MAC OS online emulator

This is the command showorfe that can be run in the OnWorks free hosting provider using one of our multiple free online workstations such as Ubuntu Online, Fedora Online, Windows online emulator or MAC OS online emulator

PROGRAM:

NAME


showorf - Display a nucleotide sequence and translation in pretty format

SYNOPSIS


showorf -sequence sequence -frames list [-table list] -outfile outfile [-ruler boolean]
[-plabel boolean] [-nlabel boolean] -width integer

showorf -help

DESCRIPTION


showorf is a command line program from EMBOSS (“the European Molecular Biology Open
Software Suite”). It is part of the "Nucleic:Gene finding,Nucleic:Translation" command
group(s).

OPTIONS


Input section
-sequence sequence

Required section
-frames list
Default value: 1,2,3,4,5,6

Additional section
-table list

Output section
-outfile outfile

-ruler boolean
Default value: Y

-plabel boolean
Default value: Y

-nlabel boolean
Default value: Y

-width integer
Default value: 50

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