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ConoSorter download for Linux

Free download ConoSorter Linux app to run online in Ubuntu online, Fedora online or Debian online

This is the Linux app named ConoSorter whose latest release can be downloaded as ConoSorter_v1.1.zip. It can be run online in the free hosting provider OnWorks for workstations.

Download and run online this app named ConoSorter with OnWorks for free.

Follow these instructions in order to run this app:

- 1. Downloaded this application in your PC.

- 2. Enter in our file manager https://www.onworks.net/myfiles.php?username=XXXXX with the username that you want.

- 3. Upload this application in such filemanager.

- 4. Start the OnWorks Linux online or Windows online emulator or MACOS online emulator from this website.

- 5. From the OnWorks Linux OS you have just started, goto our file manager https://www.onworks.net/myfiles.php?username=XXXXX with the username that you want.

- 6. Download the application, install it and run it.

ConoSorter


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DESCRIPTION

ConoSorter is a high-throughput standalone program that implements regular expressions and profile Hidden Markov Models (pHMMs) for large-scale identification and classification of precursor conopeptides into gene superfamilies and classes based on the ER signal, pro-, and mature conopeptide regions generated from raw next-generation transcriptomic or proteomic data.

ConoSorter also generates a set of relevant additional information (frequency of protein sequences, length, number of cysteine residues, hydrophobicity rate of N-terminal region) and automatically searches ConoServer database to allow the user to assess the reliability and relevance of the results and to aid the identification of new conopeptide superfamilies and classes.



Features

  • ConoSorter_v1.1 Update (2013-11-06): New Superfamilies (V. Lavergne et al., BMC Genomics - 2013; AH. Jin et al., MCP - 2013) and Class (C. Moeller et al., JBC - 2010).



Categories

Bio-Informatics

This is an application that can also be fetched from https://sourceforge.net/projects/conosorter/. It has been hosted in OnWorks in order to be run online in an easiest way from one of our free Operative Systems.


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