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aevol_create - Online in the Cloud

Run aevol_create in OnWorks free hosting provider over Ubuntu Online, Fedora Online, Windows online emulator or MAC OS online emulator

This is the command aevol_create that can be run in the OnWorks free hosting provider using one of our multiple free online workstations such as Ubuntu Online, Fedora Online, Windows online emulator or MAC OS online emulator

PROGRAM:

NAME


aevol - an in silico experimental evolution platform

SYNOPSIS


aevol_create -h or --help
aevol_create -V or --version
aevol_create [-v] [-f PARAM_FILE] [-o OUTDIR] [-c CFILE] [-p PFILE]

DESCRIPTION


Aevol is a simulation platform that allows one to let populations of digital organisms
evolve in different conditions and study experimentally the mechanisms responsible for the
structuration of the genome and the transcriptome.

aevol_create
create an experiment with setup as specified in param_file

OPTIONS


-h, --help
print help, then exit

-V, --version
print version number, then exit

-f, --file PARAM_FILE
specify parameter file (default: param.in)

-o, --out OUTDIR
specify output directory (default "./")

-c, --chromosome CFILE
load chromosome from given text file instead of generating it

-p, --plasmid PFILE
load plasmid from given text file instead of generating it (params must allow
plasmids)

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