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asn2xml - Online in the Cloud

Run asn2xml in OnWorks free hosting provider over Ubuntu Online, Fedora Online, Windows online emulator or MAC OS online emulator

This is the command asn2xml that can be run in the OnWorks free hosting provider using one of our multiple free online workstations such as Ubuntu Online, Fedora Online, Windows online emulator or MAC OS online emulator

PROGRAM:

NAME


asn2xml - translate biological data from ASN.1 to XML

SYNOPSIS


asn2xml [-] [-b F] [-e] [-i filename] [-l filename] [-o filename] [-s]

DESCRIPTION


asn2xml converts an NCBI Seq-entry or Bioseq-set from ASN.1 format to an isomorphic XML
representation. It differs from asn2asn -x in that it converts packed sequence data back
into human-readable ASCII text.

OPTIONS


A summary of options is included below.

- Print usage message

-b F Input asnfile in text mode

-e Input is a Seq-entry

-i filename
Read ASN.1 from filename (default is stdin)

-l filename
Log errors to filename (default is stderr)

-o filename
Write XML to filename (default is stdout)

-s Input is a Seq-submit

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