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cmtk-split - Online in the Cloud

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This is the command cmtk-split that can be run in the OnWorks free hosting provider using one of our multiple free online workstations such as Ubuntu Online, Fedora Online, Windows online emulator or MAC OS online emulator

PROGRAM:

NAME


split - Split images

SYNOPSIS


split InputImage OutputImagePattern

DESCRIPTION


Split volume image into sub-images, i.e., to separate interleaved images into passes

OPTIONS


Global Toolkit Options (these are shared by all CMTK tools)
--help
Write list of basic command line options to standard output.

--help-all
Write complete list of basic and advanced command line options to standard output.

--wiki
Write list of command line options to standard output in MediaWiki markup.

--man
Write man page source in 'nroff' markup to standard output.

--version
Write toolkit version to standard output.

--echo
Write the current command line to standard output.

--verbose-level <integer>
Set verbosity level.

--verbose, -v
Increment verbosity level by 1 (deprecated; supported for backward compatibility).

--threads <integer>
Set maximum number of parallel threads (for POSIX threads and OpenMP).

Orientation Options
--slice-orientation
Define slice axis for splitting. Supported values: "axial", "sagittal", "coronal",
"interleave-x", "interleave-y", "interleave-z", where the default is "axial", or use
one of the following:

--axial, -a
Interleaved axial images [This is the default]

--sagittal, -s
Interleaved sagittal images

--coronal, -c
Interleaved coronal images

--interleave-x, -x
Interleaved along x axis

--interleave-y, -y
Interleaved along y axis

--interleave-z, -z
Interleaved along z axis [This is the default]

Splitting Options
--factor <integer>, -f <integer>
Interleave factor. This is the number of subimages generated. If this is set to zero,
a separate 2D output image is generated for each slice in the input (in the given
slice orientation). [Default: 2]

Output Options
--padded, -p
Padded output, i.e., fill in removed slices

--output-xform-path <string>
Optional path template (fprintf-style) for output affine transformation that maps
input image coordinates to each output image. [Default: NONE]

AUTHORS


Torsten Rohlfing, with contributions from Michael P. Hasak, Greg Jefferis, Calvin R.
Maurer, Daniel B. Russakoff, and Yaroslav Halchenko

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