EnglishFrenchSpanish

Ad


OnWorks favicon

dbiblaste - Online in the Cloud

Run dbiblaste in OnWorks free hosting provider over Ubuntu Online, Fedora Online, Windows online emulator or MAC OS online emulator

This is the command dbiblaste that can be run in the OnWorks free hosting provider using one of our multiple free online workstations such as Ubuntu Online, Fedora Online, Windows online emulator or MAC OS online emulator

PROGRAM:

NAME


dbiblast - Index a BLAST database

SYNOPSIS


dbiblast -dbname string -directory directory -filenames string -release string
-date string -seqtype list -blastversion list -fields list -exclude string
-sortoptions string -maxindex integer -systemsort boolean -cleanup boolean
-sourcefile boolean -outfile outfile -indexoutdir outdir

dbiblast -help

DESCRIPTION


dbiblast is a command line program from EMBOSS (“the European Molecular Biology Open
Software Suite”). It is part of the "Utils:Database indexing" command group(s).

OPTIONS


Input section
-dbname string

-directory directory
Default value: .

-filenames string
Default value: $(dbname)

Required section
-release string
Default value: 0.0

-date string
Default value: 00/00/00

-seqtype list
Default value: unknown

-blastversion list
Default value: unknown

Advanced section
-fields list
Default value: acc

-exclude string

-sortoptions string
Sort options, typically '-T .' to use current directory for work files and '-k 1,1' to
force GNU sort to use the first field Default value: -T . -k 1,1

-maxindex integer

-systemsort boolean
Default value: Y

-cleanup boolean
Default value: Y

-sourcefile boolean

Output section
-outfile outfile

-indexoutdir outdir
Default value: .

Use dbiblaste online using onworks.net services


Free Servers & Workstations

Download Windows & Linux apps

  • 1
    Image Downloader
    Image Downloader
    Crawl and download images using
    Selenium Using python3 and PyQt5.
    Supported Search Engine: Google, Bing,
    Baidu. Keywords input from the keyboard
    or input from ...
    Download Image Downloader
  • 2
    Eclipse Tomcat Plugin
    Eclipse Tomcat Plugin
    The Eclipse Tomcat Plugin provides
    simple integration of a tomcat servlet
    container for the development of java
    web applications. You can join us for
    discussio...
    Download Eclipse Tomcat Plugin
  • 3
    WebTorrent Desktop
    WebTorrent Desktop
    WebTorrent Desktop is for streaming
    torrents on Mac, Windows or Linux. It
    connects to both BitTorrent and
    WebTorrent peers. Now there's no
    need to wait for...
    Download WebTorrent Desktop
  • 4
    GenX
    GenX
    GenX is a scientific program to refine
    x-ray refelcetivity, neutron
    reflectivity and surface x-ray
    diffraction data using the differential
    evolution algorithm....
    Download GenX
  • 5
    pspp4windows
    pspp4windows
    PSPP is a program for statistical
    analysis of sampled data. It is a free
    replacement for the proprietary program
    SPSS. PSPP has both text-based and
    graphical us...
    Download pspp4windows
  • 6
    Git Extensions
    Git Extensions
    Git Extensions is a standalone UI tool
    for managing Git repositories. It also
    integrates with Windows Explorer and
    Microsoft Visual Studio
    (2015/2017/2019). Th...
    Download Git Extensions
  • More »

Linux commands

Ad