This is the command EDTSurf that can be run in the OnWorks free hosting provider using one of our multiple free online workstations such as Ubuntu Online, Fedora Online, Windows online emulator or MAC OS online emulator
PROGRAM:
NAME
EDTSurf - quick and accurate construction of macromolecular surfaces
SYNOPSIS
EDTSurf -i pdbname ...
DESCRIPTION
EDTSurf is a open source program to construct triangulated surfaces for macromolecules. It
generates three major macromolecular surfaces: van der Waals surface, solvent-accessible
surface and molecular surface (solvent-excluded surface). EDTsurf also identifies cavities
which are inside of macromolecules.
OPTIONS
-o outname
-t 1-MC 2-VCMC
-s 1-VWS 2-SAS 3-MS 4-SES
-c 1-pure 2-atom 3-chain
-p probe radius [0,2.0]
-f scale factor (0,20.0]
-h 1-in and out 2-out 3-in
output1: outname.ply
output2: outname.asa
output3: outname-cav.pdb
Use EDTSurf online using onworks.net services
