This is the command extractBCITrees that can be run in the OnWorks free hosting provider using one of our multiple free online workstations such as Ubuntu Online, Fedora Online, Windows online emulator or MAC OS online emulator
PROGRAM:
NAME
extractBCITrees - part of mauveAligner package reads all trees and their posterior from a
set of MrBayes .trprobs files
SYNOPSIS
extractBCITrees <random seed> <BCI threshold> <max output trees> <MrBayes .trprobs input
file 1 .. N> <nexus output file>
DESCRIPTION
This program reads all trees and their posterior from a set of MrBayes .trprobs files and
sums and normalizes posteriors for each topology. All trees that meet a Bayes Credible
Interval threshold will be saved, up to some maximum number of trees. <BCI Threshold> A
number between 0 and 1 giving the BCI threshold. 0.9 is a good choice. <max output
trees> Limit the output to this many trees. All trees in the input file must have
the same number of taxa and the same taxon labels
Use extractBCITrees online using onworks.net services
