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fasta2DAM - Online in the Cloud

Run fasta2DAM in OnWorks free hosting provider over Ubuntu Online, Fedora Online, Windows online emulator or MAC OS online emulator

This is the command fasta2DAM that can be run in the OnWorks free hosting provider using one of our multiple free online workstations such as Ubuntu Online, Fedora Online, Windows online emulator or MAC OS online emulator

PROGRAM:

NAME


fasta2DAM - build a Dazzler map database from fasta files

SYNOPSIS


fasta2DAM [-v] path:dam ( -ffile | input:fasta ... )

DESCRIPTION


Builds a map DB or DAM from the list of .fasta files following the map database name
argument, or if the -f option is used, the list of .fasta files in file. Any .fasta entry
that has a run of N's in it will be split into separate "contig" entries and the interval
of the contig in the original entry recorded. The header for each .fasta entry is saved
with the contigs created from it.

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