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ffitche - Online in the Cloud

Run ffitche in OnWorks free hosting provider over Ubuntu Online, Fedora Online, Windows online emulator or MAC OS online emulator

This is the command ffitche that can be run in the OnWorks free hosting provider using one of our multiple free online workstations such as Ubuntu Online, Fedora Online, Windows online emulator or MAC OS online emulator

PROGRAM:

NAME


ffitch - Fitch-Margoliash and Least-Squares Distance Methods

SYNOPSIS


ffitch -datafile distances -intreefile tree [-matrixtype list] [-minev boolean]
-njumble integer -seed integer [-outgrno integer] [-power float] -lengths boolean
-negallowed boolean -global boolean [-replicates boolean] -outfile outfile
[-trout toggle] -outtreefile outfile [-printdata boolean] [-progress boolean]
[-treeprint boolean]

ffitch -help

DESCRIPTION


ffitch is a command line program from EMBOSS (“the European Molecular Biology Open
Software Suite”). It is part of the "Phylogeny:Distance matrix" command group(s).

OPTIONS


Input section
-datafile distances
File containing one or more distance matrices

-intreefile tree

Additional section
-matrixtype list
Default value: s

-minev boolean
Default value: N

-njumble integer

-seed integer
Default value: 1

-outgrno integer

-power float
Default value: 2.0

-lengths boolean
Default value: N

-negallowed boolean
Default value: N

-global boolean
Default value: N

-replicates boolean
Default value: N

Output section
-outfile outfile

-trout toggle
Default value: Y

-outtreefile outfile

-printdata boolean
Default value: N

-progress boolean
Default value: Y

-treeprint boolean
Default value: Y

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