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fmixe - Online in the Cloud

Run fmixe in OnWorks free hosting provider over Ubuntu Online, Fedora Online, Windows online emulator or MAC OS online emulator

This is the command fmixe that can be run in the OnWorks free hosting provider using one of our multiple free online workstations such as Ubuntu Online, Fedora Online, Windows online emulator or MAC OS online emulator

PROGRAM:

NAME


fmix - Mixed parsimony algorithm

SYNOPSIS


fmix -infile discretestates -intreefile tree [-weights properties] [-ancfile properties]
[-mixfile properties] -method list -njumble integer -seed integer [-outgrno integer]
[-threshold float] -outfile outfile [-trout toggle] -outtreefile outfile
[-printdata boolean] [-progress boolean] [-treeprint boolean] [-ancseq boolean]
[-stepbox boolean]

fmix -help

DESCRIPTION


fmix is a command line program from EMBOSS (“the European Molecular Biology Open Software
Suite”). It is part of the "Phylogeny:Discrete characters" command group(s).

OPTIONS


Input section
-infile discretestates
File containing one or more data sets

-intreefile tree

-weights properties

-ancfile properties

-mixfile properties

Additional section
-method list
Default value: Wagner

-njumble integer

-seed integer
Default value: 1

-outgrno integer

-threshold float
Default value: $(infile.discretesize)

Output section
-outfile outfile

-trout toggle
Default value: Y

-outtreefile outfile

-printdata boolean
Default value: N

-progress boolean
Default value: Y

-treeprint boolean
Default value: Y

-ancseq boolean
Default value: N

-stepbox boolean
Default value: N

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