This is the command gt-bed_to_gff3 that can be run in the OnWorks free hosting provider using one of our multiple free online workstations such as Ubuntu Online, Fedora Online, Windows online emulator or MAC OS online emulator
PROGRAM:
NAME
gt-bed_to_gff3 - Parse BED file and convert it to GFF3.
SYNOPSIS
gt bed_to_gff3 [BED_file]
DESCRIPTION
-featuretype [string]
Set type of parsed BED features (default: BED_feature)
-thicktype [string]
Set type of parsed thick BED features (default: BED_thick_feature)
-blocktype [string]
Set type of parsed BED blocks (default: BED_block)
-o [filename]
redirect output to specified file (default: undefined)
-gzip [yes|no]
write gzip compressed output file (default: no)
-bzip2 [yes|no]
write bzip2 compressed output file (default: no)
-force [yes|no]
force writing to output file (default: no)
-help
display help and exit
-version
display version information and exit
REPORTING BUGS
Report bugs to <[email protected]>.
Use gt-bed_to_gff3 online using onworks.net services
