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gt-matstat - Online in the Cloud

Run gt-matstat in OnWorks free hosting provider over Ubuntu Online, Fedora Online, Windows online emulator or MAC OS online emulator

This is the command gt-matstat that can be run in the OnWorks free hosting provider using one of our multiple free online workstations such as Ubuntu Online, Fedora Online, Windows online emulator or MAC OS online emulator

PROGRAM:

NAME


gt-matstat - Compute matching statistics.

SYNOPSIS


gt matstat [options ...] -query queryfile [...]

DESCRIPTION


-fmi [string]
specify fmindex (default: undefined)

-esa [string]
specify suffix array (default: undefined)

-pck [string]
specify packed index (default: undefined)

-query
specify queryfiles

-min [value]
only output length if >= given minimum length (default: 0)

-max [value]
only output length if ⇐ given maximum length (default: 0)

-output
set output flags (sequence, querypos, subjectpos)

-help
display help and exit

-version
display version information and exit

ADDITIONAL INFORMATION


For detailed information, please refer to the manual of matstat.

REPORTING BUGS


Report bugs to <kurtz@zbh.uni-hamburg.de>.

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