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PROGRAM:

NAME


mia-3dtrackpixelmovement - Track positions in 3D

SYNOPSIS


mia-3dtrackpixelmovement -i <in-file> -o <out-file> -t <transformation> [options]

DESCRIPTION


mia-3dtrackpixelmovement Track the position of a pixel by means of a transformation
obtained by using image registration. The pixel data is given in CSV format
id;time;x;y;z;reserved

The fields 'time', 'x', 'y', and 'z' are updated, and the fields 'id' and 'reserved' are
preserved, empty lines are ignored.

OPTIONS


File-IO
-i --in-file=(input, required); string
input point set

-o --out-file=(output, required); string
output point set

-t --transformation=(input, required); io
transformation describing the monitored change For supported file types see
PLUGINS:3dtransform/io

Parameters
-T --time-step=1
time step to use for the position updatetime step to use for the position
update

Help & Info
-V --verbose=warning
verbosity of output, print messages of given level and higher priorities.
Supported priorities starting at lowest level are:
info ‐ Low level messages
trace ‐ Function call trace
fail ‐ Report test failures
warning ‐ Warnings
error ‐ Report errors
debug ‐ Debug output
message ‐ Normal messages
fatal ‐ Report only fatal errors

--copyright
print copyright information

-h --help
print this help

-? --usage
print a short help

--version
print the version number and exit

Processing
--threads=-1
Maxiumum number of threads to use for processing,This number should be lower
or equal to the number of logical processor cores in the machine. (-1:
automatic estimation).Maxiumum number of threads to use for processing,This
number should be lower or equal to the number of logical processor cores in
the machine. (-1: automatic estimation).

PLUGINS: 3dtransform/io


bbs Binary (non-portable) serialized IO of 3D transformations

Recognized file extensions: .bbs

datapool Virtual IO to and from the internal data pool

Recognized file extensions: .@

vista Vista storage of 3D transformations

Recognized file extensions: .v, .v3dt

xml XML serialized IO of 3D transformations

Recognized file extensions: .x3dt

EXAMPLE


This program evaluated the changed position of pixels given in input.csv, by using a time
step of 2.0 time units and the transformation change.v3df, and writes the updated
positions to updated.csv.

mia-3dtrackpixelmovement -i input.csv -o output.cvs --time-step 2.0 --transformation
change.v3df

AUTHOR(s)


Gert Wollny

COPYRIGHT


This software is Copyright (c) 1999‐2015 Leipzig, Germany and Madrid, Spain. It comes
with ABSOLUTELY NO WARRANTY and you may redistribute it under the terms of the GNU
GENERAL PUBLIC LICENSE Version 3 (or later). For more information run the program with the
option '--copyright'.

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