mia-3dvf2transform - Online in the Cloud

PROGRAM:

NAME

mia-3dvf2transform - Convert a 3D vectorfield from a 3D transformation.

SYNOPSIS

mia-3dvf2transform -i <in-file> -o <out-file> [options]

DESCRIPTION

mia-3dvf2transform Creates a 3D transformation from a vector field. The input vector field
is simply encapsulated into the transformation file format. The boundary conditions and
the image interpolator kernel can be set at the command line.

OPTIONS

-i --in-file=(input, required); io
input transformation For supported file types see PLUGINS:3dvf/io

-o --out-file=(output, required); io
output vector field For supported file types see PLUGINS:3dtransform/io

-k --imgkernel=bspline:d=3
image interpolator kernel which is used when the transformation is applied
to an imageimage interpolator kernel which is used when the transformation
is applied to an image For supported plugins see PLUGINS:1d/splinekernel

-b --imgboundary=mirror
Boundary condition applied when the transformation is used to transform an
imageBoundary condition applied when the transformation is used to transform
an image For supported plugins see PLUGINS:1d/splinebc

Help & Info
-V --verbose=warning
verbosity of output, print messages of given level and higher priorities.
Supported priorities starting at lowest level are:
info ‐ Low level messages
trace ‐ Function call trace
fail ‐ Report test failures
warning ‐ Warnings
error ‐ Report errors
debug ‐ Debug output
message ‐ Normal messages
fatal ‐ Report only fatal errors

--copyright
print copyright information

-h --help
print this help

-? --usage
print a short help

--version
print the version number and exit

Processing
--threads=-1
Maxiumum number of threads to use for processing,This number should be lower
or equal to the number of logical processor cores in the machine. (-1:
automatic estimation).Maxiumum number of threads to use for processing,This
number should be lower or equal to the number of logical processor cores in
the machine. (-1: automatic estimation).

PLUGINS: 1d/splinebc

mirror Spline interpolation boundary conditions that mirror on the boundary

(no parameters)

repeat Spline interpolation boundary conditions that repeats the value at the boundary

(no parameters)

zero Spline interpolation boundary conditions that assumes zero for values outside

(no parameters)

PLUGINS: 1d/splinekernel

bspline B-spline kernel creation , supported parameters are:

d = 3; int in [0, 5]
Spline degree.

omoms OMoms-spline kernel creation, supported parameters are:

d = 3; int in [3, 3]
Spline degree.

PLUGINS: 3dtransform/io

bbs Binary (non-portable) serialized IO of 3D transformations

Recognized file extensions: .bbs

datapool Virtual IO to and from the internal data pool

Recognized file extensions: .@

vista Vista storage of 3D transformations

Recognized file extensions: .v, .v3dt

xml XML serialized IO of 3D transformations

Recognized file extensions: .x3dt

PLUGINS: 3dvf/io

cvista obsolete 3d vector field io plugin for range compressend vista (saving not
supported)

Recognized file extensions: .CVF, .cvf

Supported element types:
floating point 32 bit

datapool Virtual IO to and from the internal data pool

Recognized file extensions: .@

vista a 3d vector field io plugin for vista

Recognized file extensions: .V, .VF, .v, .vf

Supported element types:
floating point 32 bit

vtk 3D Vector field in- and output (experimental). No attributes are stored or read.

Recognized file extensions: .VTK, .VTKVF, .vtk, .vtkvf

Supported element types:
floating point 32 bit

EXAMPLE

Transform the input vector field field.vtk to the transformation trans.v3df and specify
zero boundary conditions and b-splines of degree 2 for image interpolation.

mia-3dvf2transform -i field.vtk -o trans.v3df --imgkernel bspline:d=2 --imgboundary zero

AUTHOR(s)

Gert Wollny

COPYRIGHT

This software is Copyright (c) 1999‐2015 Leipzig, Germany and Madrid, Spain. It comes
with ABSOLUTELY NO WARRANTY and you may redistribute it under the terms of the GNU
GENERAL PUBLIC LICENSE Version 3 (or later). For more information run the program with the
option '--copyright'.

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