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mira - Online in the Cloud

Run mira in OnWorks free hosting provider over Ubuntu Online, Fedora Online, Windows online emulator or MAC OS online emulator

This is the command mira that can be run in the OnWorks free hosting provider using one of our multiple free online workstations such as Ubuntu Online, Fedora Online, Windows online emulator or MAC OS online emulator

PROGRAM:

NAME


mira - The Genome and EST Sequence Assembly System

DESCRIPTION


The mira genome fragment assembler is a specialised assembler for sequencing projects
classified as 'hard' due to high number of similar repeats. For expressed sequence tags
(ESTs) transcripts, miraEST is specialised on reconstructing pristine mRNA transcripts
while detecting and classifying single nucleotide polymorphisms (SNP) occurring in
different variations thereof.

The assembler is routinely used for such various tasks as mutation detection in different
cell types, similarity analysis of transcripts between organisms, and pristine assembly of
sequences from various sources for oligo design in clinical microarray experiments.

The purpose of the mira executable is to assemble sequencing data.

SYNOPSIS


mira [OPTION] manifest_file [manifest_file] ...

OPTIONS


-c / --cwd=directory
Change working directory

-r / --resume
Resume an interrupted assembly

-h / --help
Print short help and exit

-v / --version
Print version and exit

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