This is the command pmrna that can be run in the OnWorks free hosting provider using one of our multiple free online workstations such as Ubuntu Online, Fedora Online, Windows online emulator or MAC OS online emulator
PROGRAM:
NAME
pmrna - filter out all but the primary isoform from each gene of the input
SYNOPSIS
pmrna [options] < annot.gff3 > new.gff3
DESCRIPTION
Options:
-h|--help
print this help message and exit
-i|--introns
flag indicating that introns are declared explicitly and do not need to be inferred
from exon features; default is to infer introns
-l|--locus
report a single representative mRNA for each locus instead of each gene
-m|--map: FILE
write each gene/mRNA mapping to the specified file
-p|--pseudogenes
disable pseudogene detection and correction
Use pmrna online using onworks.net services
