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BioCompUP Align download for Linux

Free download BioCompUP Align Linux app to run online in Ubuntu online, Fedora online or Debian online

This is the Linux app named BioCompUP Align whose latest release can be downloaded as AlignDocumentation.tar.gz. It can be run online in the free hosting provider OnWorks for workstations.

Download and run online this app named BioCompUP Align with OnWorks for free.

Follow these instructions in order to run this app:

- 1. Downloaded this application in your PC.

- 2. Enter in our file manager https://www.onworks.net/myfiles.php?username=XXXXX with the username that you want.

- 3. Upload this application in such filemanager.

- 4. Start the OnWorks Linux online or Windows online emulator or MACOS online emulator from this website.

- 5. From the OnWorks Linux OS you have just started, goto our file manager https://www.onworks.net/myfiles.php?username=XXXXX with the username that you want.

- 6. Download the application, install it and run it.

BioCompUP Align


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DESCRIPTION

C++ library for protein sequence profile to profile alignment. Implementing numerous known alignment variants in a flexible and manageable architecture.



Features

  • Make sequence to sequence alignment
  • Make profile to sequence alignment
  • Make profile to profile alignment
  • Use three different weighting schemes in the construction of profiles
  • Use eleven different scoring functions used in alignments against profile Profile
  • Use structural information of various kinds
  • Use of penalty functions for linear gap
  • Perform global, local and semi-global alignments


Audience

Science/Research


User interface

Console/Terminal


Programming Language

C++


Categories

Bio-Informatics

This is an application that can also be fetched from https://sourceforge.net/projects/biocompupalign/. It has been hosted in OnWorks in order to be run online in an easiest way from one of our free Operative Systems.


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