This is the Linux app named crossmap to run in Linux online whose latest release can be downloaded as CrossMap-0.4.1.tar.gz. It can be run online in the free hosting provider OnWorks for workstations.
Download and run online this app named crossmap to run in Linux online with OnWorks for free.
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- 1. Downloaded this application in your PC.
- 2. Enter in our file manager https://www.onworks.net/myfiles.php?username=XXXXX with the username that you want.
- 3. Upload this application in such filemanager.
- 4. Start the OnWorks Linux online or Windows online emulator or MACOS online emulator from this website.
- 5. From the OnWorks Linux OS you have just started, goto our file manager https://www.onworks.net/myfiles.php?username=XXXXX with the username that you want.
- 6. Download the application, install it and run it.
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crossmap to run in Linux online
DESCRIPTION
CrossMap is a program for convenient conversion of genome coordinates and genomeannotation files between assemblies (eg. lift from GRCh36/hg18 to GRCh37/hg19 or vice versa).It support file in BAM, SAM, BED, Wiggle, BigWig, GFF, GTF format.Features
- Genome coordinates conversion between assembiles
- Support BAM, SAM, BigWig, Wiggle, BED, VCF input format
- Run on Linux, Mac OS
Audience
Science/Research, Education, Engineering
Programming Language
Python, C
This is an application that can also be fetched from https://sourceforge.net/projects/crossmap/. It has been hosted in OnWorks in order to be run online in an easiest way from one of our free Operative Systems.