This is the Linux app named MiModD to run in Linux online whose latest release can be downloaded as MiModD-0.1.9.tar.gz. It can be run online in the free hosting provider OnWorks for workstations.
Download and run online this app named MiModD to run in Linux online with OnWorks for free.
Follow these instructions in order to run this app:
- 1. Downloaded this application in your PC.
- 2. Enter in our file manager https://www.onworks.net/myfiles.php?username=XXXXX with the username that you want.
- 3. Upload this application in such filemanager.
- 4. Start the OnWorks Linux online or Windows online emulator or MACOS online emulator from this website.
- 5. From the OnWorks Linux OS you have just started, goto our file manager https://www.onworks.net/myfiles.php?username=XXXXX with the username that you want.
- 6. Download the application, install it and run it.
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MiModD to run in Linux online
DESCRIPTION
MiModD is a software package for genomic variant identification from next-generation sequencing (NGS) data with optimized usage of system resources and a user-friendly interface. For most model organism genomes it lets the user carry out a complete analysis from unaligned genomic NGS read data to an annotated list of variants on a regular Desktop PC within a few hours. Its user-interface is beginner-friendly and designed to encourage geneticists to analyze NGS data themselves without the help of a trained bioinformatician.Features
- WGS analysis of model organism genomes even on single PCs and notebooks
- powerful tools for variant filtering and mapping
- integration into an existing Galaxy installation with a single command
- example datasets for testing
- online tutorial and extensive documentation
- platform-specific bundled distributions (many Linux flavours, OS X) to run and test in a pre-configured Galaxy instance without installation
Audience
Science/Research, Advanced End Users
User interface
Web-based, Command-line
Programming Language
Python
This is an application that can also be fetched from https://sourceforge.net/projects/mimodd/. It has been hosted in OnWorks in order to be run online in an easiest way from one of our free Operative Systems.
