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PPIXpress download for Linux

Free download PPIXpress Linux app to run online in Ubuntu online, Fedora online or Debian online

This is the Linux app named PPIXpress whose latest release can be downloaded as PPIXpress_1.23.zip. It can be run online in the free hosting provider OnWorks for workstations.

Download and run online this app named PPIXpress with OnWorks for free.

Follow these instructions in order to run this app:

- 1. Downloaded this application in your PC.

- 2. Enter in our file manager https://www.onworks.net/myfiles.php?username=XXXXX with the username that you want.

- 3. Upload this application in such filemanager.

- 4. Start the OnWorks Linux online or Windows online emulator or MACOS online emulator from this website.

- 5. From the OnWorks Linux OS you have just started, goto our file manager https://www.onworks.net/myfiles.php?username=XXXXX with the username that you want.

- 6. Download the application, install it and run it.

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PPIXpress


DESCRIPTION

Although protein-protein interaction networks are an ubiquitous component of modern systems biology, comparatively few efforts have been made to tailor their topology to the actual cellular condition under study. Since a simple reduction of the networks to the subset of expressed genes only scratches the surface of higher organisms’ regulatory capabilities, we propose the advanced method PPIXpress that allows to exploit expression data at the transcript-level and is thus able to also reveal alterations in protein connectivity caused by alternative splicing.
The original publication can be found on https://bioinformatics.oxfordjournals.org/content/32/4/571 .



Features

  • automatic construction of protein-protein interaction networks


Audience

Healthcare Industry, Science/Research


User interface

Java Swing, Console/Terminal, Command-line


Programming Language

Java


Categories

Molecular Science, Bio-Informatics, Medical Science Apps.

This is an application that can also be fetched from https://sourceforge.net/projects/ppixpress/. It has been hosted in OnWorks in order to be run online in an easiest way from one of our free Operative Systems.


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