This is the Linux app named RAFTS3 to run in Linux online whose latest release can be downloaded as RAFTS3_LINUX64b.tar.gz. It can be run online in the free hosting provider OnWorks for workstations.
Download and run online this app named RAFTS3 to run in Linux online with OnWorks for free.
Follow these instructions in order to run this app:
- 1. Downloaded this application in your PC.
- 2. Enter in our file manager https://www.onworks.net/myfiles.php?username=XXXXX with the username that you want.
- 3. Upload this application in such filemanager.
- 4. Start the OnWorks Linux online or Windows online emulator or MACOS online emulator from this website.
- 5. From the OnWorks Linux OS you have just started, goto our file manager https://www.onworks.net/myfiles.php?username=XXXXX with the username that you want.
- 6. Download the application, install it and run it.
RAFTS3 to run in Linux online
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DESCRIPTION
RAFTS3 can perform high-speed protein search comparisons locally using a desktop computer or laptop. RAFTS3 performed searches many times faster than those with BLASTp against large protein databases such as NR and Pfam, with a small loss of sensitivity depending on the similaritydegree of the sequences. RAFTS3 is a new alternative for fast comparison of protein sequences, genome annotation and biological data mining.
Preprint: http://dx.doi.org/10.1101/055269
Precomputed databases evaluated on paper are available for download at http://www.bioinfo.ufpr.br/software/rafts3
Features
- Sequence Comparison
- Alignment-Free
Audience
Science/Research
User interface
Command-line
Programming Language
MATLAB
This is an application that can also be fetched from https://sourceforge.net/projects/rafts3/. It has been hosted in OnWorks in order to be run online in an easiest way from one of our free Operative Systems.
