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SWAPHI: Smith-Waterman on Intel Xeon Phi download for Linux

Free download SWAPHI: Smith-Waterman on Intel Xeon Phi Linux app to run online in Ubuntu online, Fedora online or Debian online

This is the Linux app named SWAPHI: Smith-Waterman on Intel Xeon Phi whose latest release can be downloaded as swaphi-v1.0.5.tar.gz. It can be run online in the free hosting provider OnWorks for workstations.

Download and run online this app named SWAPHI: Smith-Waterman on Intel Xeon Phi with OnWorks for free.

Follow these instructions in order to run this app:

- 1. Downloaded this application in your PC.

- 2. Enter in our file manager https://www.onworks.net/myfiles.php?username=XXXXX with the username that you want.

- 3. Upload this application in such filemanager.

- 4. Start the OnWorks Linux online or Windows online emulator or MACOS online emulator from this website.

- 5. From the OnWorks Linux OS you have just started, goto our file manager https://www.onworks.net/myfiles.php?username=XXXXX with the username that you want.

- 6. Download the application, install it and run it.

SWAPHI: Smith-Waterman on Intel Xeon Phi


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DESCRIPTION

The first parallel algorithm to accelerate the Smith-Waterman protein database search on shared-host multiple Intel Xeon Phi coprocessors. By searching against the UniProtKB/TrEMBL database, SWAPHI achieves a performance of up to 58.8 billion cell updates per second (GCUPS) on a single Xeon Phi and up to 228.4 GCUPS on four Xeon Phis.



Audience

Science/Research, Education, Engineering


User interface

.NET/Mono, Console/Terminal


Programming Language

C++, ALGOL 68


Categories

Bio-Informatics

This is an application that can also be fetched from https://sourceforge.net/projects/swaphi/. It has been hosted in OnWorks in order to be run online in an easiest way from one of our free Operative Systems.


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