This is the Windows app named Xi Spectrum Viewer to run in Windows online over Linux online whose latest release can be downloaded as AA-XiSpectrumViewer-121011.153206.html. It can be run online in the free hosting provider OnWorks for workstations.
Download and run online this app named Xi Spectrum Viewer to run in Windows online over Linux online with OnWorks for free.
Follow these instructions in order to run this app:
- 1. Downloaded this application in your PC.
- 2. Enter in our file manager https://www.onworks.net/myfiles.php?username=XXXXX with the username that you want.
- 3. Upload this application in such filemanager.
- 4. Start any OS OnWorks online emulator from this website, but better Windows online emulator.
- 5. From the OnWorks Windows OS you have just started, goto our file manager https://www.onworks.net/myfiles.php?username=XXXXX with the username that you want.
- 6. Download the application and install it.
- 7. Download Wine from your Linux distributions software repositories. Once installed, you can then double-click the app to run them with Wine. You can also try PlayOnLinux, a fancy interface over Wine that will help you install popular Windows programs and games.
Wine is a way to run Windows software on Linux, but with no Windows required. Wine is an open-source Windows compatibility layer that can run Windows programs directly on any Linux desktop. Essentially, Wine is trying to re-implement enough of Windows from scratch so that it can run all those Windows applications without actually needing Windows.
SCREENSHOTS
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Xi Spectrum Viewer to run in Windows online over Linux online
DESCRIPTION
To overcome current limitations in published MS data accessibility, we introduce a browser-based spectrum viewer that aims to allow exploration of alternative interpretations for MS spectra and additionally: can be operated by non-specialists, is open source, can be integrated into other software, gives appropriate publication-quality output.Spectrum Viewer is implemented totally on the client side using XHTML for menus and dialogs, SVG for spectrum and peptide display, and Javascript to drive functionality. It comprises 3 parts: (1) the core Spectrum Viewer displays peptide-spectrum matches and implements zooming, mouse-over peaks to highlight matching parts of peptide, mouse-over parts of peptide to highlight matching peaks, export SVG, and API; (2) the Auxiliary Annotator matches peptide to spectrum for given parameters and prepares the data for the Viewer; (3) these reside on a web page that provides the user control over peptides, spectra and other parameters e.g. linker mass.
Features
- Import peaklist
- Specify a single peptide, a peptide pair, or a cross-linked peptide pair with linker positions
- Modify various parameters, e.g. modifications
- Perform annotation of spectrum based on specified parameters
- Zoom
- Hover on peaks to highlight sequence
- Hover on sequence to highlight peaks
- Export SVG
- Successfully tested in Firefox, Chrome, Safari, Internet Explorer.
Audience
Science/Research, Developers, End Users/Desktop, Testers
User interface
Web-based
Programming Language
JavaScript
This is an application that can also be fetched from https://sourceforge.net/projects/spectrumviewer/. It has been hosted in OnWorks in order to be run online in an easiest way from one of our free Operative Systems.
