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DAM2fasta - Online in the Cloud

Run DAM2fasta in OnWorks free hosting provider over Ubuntu Online, Fedora Online, Windows online emulator or MAC OS online emulator

This is the command DAM2fasta that can be run in the OnWorks free hosting provider using one of our multiple free online workstations such as Ubuntu Online, Fedora Online, Windows online emulator or MAC OS online emulator

PROGRAM:

NAME


DAM2fasta - get fasta files from Dazzler map DB

SYNOPSIS


DAM2fasta [-vU] [-wint(80)] path:dam

DESCRIPTION


The set of .fasta files for the given map DB or DAM are recreated from the DAM exactly as
they were input. That is, this is a perfect inversion, including the reconstitution of
the proper .fasta headers and the concatenation of contigs with the proper number of N's
between them. By default the output sequences are in lower case and 80 chars per line.
The -U option specifies upper case should be used, and the characters per line, or line
width, can be set to any positive value with the -w option.

Use DAM2fasta online using onworks.net services


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