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DB2fasta - Online in the Cloud

Run DB2fasta in OnWorks free hosting provider over Ubuntu Online, Fedora Online, Windows online emulator or MAC OS online emulator

This is the command DB2fasta that can be run in the OnWorks free hosting provider using one of our multiple free online workstations such as Ubuntu Online, Fedora Online, Windows online emulator or MAC OS online emulator

PROGRAM:

NAME


DB2fasta - create fasta files from a Dazzler database

SYNOPSIS


DB2fasta [-vU] [-wint(80)] path:db

DESCRIPTION


The set of .fasta files for the given DB are recreated from the DB exactly as they were
input. That is, this is a perfect inversion, including the reconstitution of the proper
.fasta headers. Because of this property, one can, if desired, delete the .fasta source
files once they are in the DB as they can always be recreated from it. By default the
output sequences are in lower case and 80 chars per line. The -U option specifies upper
case should be used, and the characters per line, or line width, can be set to any
positive value with the -w option.

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