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dbshowquerye - Online in the Cloud

Run dbshowquerye in OnWorks free hosting provider over Ubuntu Online, Fedora Online, Windows online emulator or MAC OS online emulator

This is the command dbshowquerye that can be run in the OnWorks free hosting provider using one of our multiple free online workstations such as Ubuntu Online, Fedora Online, Windows online emulator or MAC OS online emulator

PROGRAM:

NAME


dbshowquery - Show possible database queries that use a given data identifier

SYNOPSIS


dbshowquery -identifier string -database string -datatype string [-outfile outfile]
[-html boolean]

dbshowquery -help

DESCRIPTION


dbshowquery is a command line program from EMBOSS (“the European Molecular Biology Open
Software Suite”). It is part of the "Information" command group(s).

OPTIONS


Input section
-identifier string
This is a data identifier (e.g. a sequence accession number) that is used to specify
the data (of type 'datatype') to retrieve. If you're unsure of the data identifier(s)
that are used for a given query (database/datatype) use dbtellquery. The types of data
identifier are listed under the 'Data identifier' branch of the EDAM ontology
(http://edamontology.sourceforge.net/). For example values, see the catalogue of
public databases in the EMBOSS data file DRCAT.dat. If you have a data identifier but
are unsure of its type, use idtell.

Required section
Additional section
Advanced section
-database string
This is the name of a database from the catalogue of public databases in the EMBOSS
data file DRCAT.dat. If you are unsure of the available databases use drfind. If you
have a database name but are not sure its valid, use isdbname.

-datatype string
This is the name of a retrievable datatype from the catalogue of public databases in
the EMBOSS data file DRCAT.dat. The names are terms from the 'data' branch of the EDAM
ontology, http://edamontology.sourceforge.net/. If you are unsure of the available
retrievable datatypes for a given database, use dbtellquery. If you have a datatype
name but are not sure its valid, use isdbdata.

Output section
-outfile outfile
Default value: stdout

Html section
-html boolean
If you are sending the output to a file, this will format it for displaying as a table
in a WWW document. Default value: N

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