EnglishFrenchSpanish

Ad


OnWorks favicon

DBsplit - Online in the Cloud

Run DBsplit in OnWorks free hosting provider over Ubuntu Online, Fedora Online, Windows online emulator or MAC OS online emulator

This is the command DBsplit that can be run in the OnWorks free hosting provider using one of our multiple free online workstations such as Ubuntu Online, Fedora Online, Windows online emulator or MAC OS online emulator

PROGRAM:

NAME


DBsplit - divide a Dazzler database into a series of blocks

SYNOPSIS


DBsplit [-a] [-xint] [-sint(200)] path:db|dam

DESCRIPTION


Divide the database path.db or path.dam conceptually into a series of blocks referable to
on the command line as path.1, path.2, ... If the -x option is set then all reads less
than the given length are ignored, and if the -a option is not set then secondary reads
from a given well are also ignored. The remaining reads, constituting what we call the
trimmed DB, are split amongst the blocks so that each block is of size -s * 1Mbp except
for the last which necessarily contains a smaller residual. The default value for -s is
200Mbp because blocks of this size can be compared by our "overlapper" daligner(1) in
roughly 16Gb of memory. The blocks are very space efficient in that their sub-index of
the master .idx is computed on the fly when loaded, and the .bps and .qvs files (if a .db)
of base pairs and quality values, respectively, is shared with the master DB. Any
relevant portions of tracks associated with the DB are also computed on the fly when
loading a database block.

Use DBsplit online using onworks.net services


Free Servers & Workstations

Download Windows & Linux apps

  • 1
    ExpressLuke GSI
    ExpressLuke GSI
    This SourceForge download page was to
    grant users to download my source built
    GSIs, based upon phhusson's great
    work. I build both Android Pie and
    Android 1...
    Download ExpressLuke GSI
  • 2
    PyQt
    PyQt
    PyQt is the Python bindings for
    Digia's Qt cross-platform
    application development framework. It
    supports Python v2 and v3 and Qt v4 and
    Qt v5. PyQt is avail...
    Download PyQt
  • 3
    garlic3
    garlic3
    Gambas3* coding tools and examples for
    use in SMB or other organizations that
    make internal programs. E.g. from
    database fields to class sourcecode with
    DbInfo...
    Download garlic3
  • 4
    Sardi
    Sardi
    Sardi is a complete restyling and
    optimisation of svg code. 6 choices for
    your applications and 10 kind of folders
    to use in your file manager. The sardi
    icons...
    Download Sardi
  • 5
    LMMS Digital Audio Workstation
    LMMS Digital Audio Workstation
    LMMS is a free cross-platform software
    which allows you to produce music with
    your computer. If you like this project
    consider getting involved in the project
    h...
    Download LMMS Digital Audio Workstation
  • 6
    FreeRTOS Real Time Kernel (RTOS)
    FreeRTOS Real Time Kernel (RTOS)
    FreeRTOS is a market-leading real-time
    operating system (RTOS) for
    microcontrollers and small
    microprocessors. Distributed freely
    under the MIT open source lice...
    Download FreeRTOS Real Time Kernel (RTOS)
  • 7
    Avogadro
    Avogadro
    Avogadro is an advanced molecular
    editor designed for cross-platform use
    in computational chemistry, molecular
    modeling, bioinformatics, materials
    science and ...
    Download Avogadro
  • More »

Linux commands

Ad