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edamdefe - Online in the Cloud

Run edamdefe in OnWorks free hosting provider over Ubuntu Online, Fedora Online, Windows online emulator or MAC OS online emulator

This is the command edamdefe that can be run in the OnWorks free hosting provider using one of our multiple free online workstations such as Ubuntu Online, Fedora Online, Windows online emulator or MAC OS online emulator

PROGRAM:

NAME


edamdef - Find EDAM ontology terms by definition

SYNOPSIS


edamdef -query string [-namespace list] -subclasses boolean -obsolete boolean
-edamdef outobo

edamdef -help

DESCRIPTION


edamdef is a command line program from EMBOSS (“the European Molecular Biology Open
Software Suite”). It is part of the "Ontology:EDAM,Data retrieval:Ontology data" command
group(s).

OPTIONS


Input section
-query string

Additional section
-namespace list
By default all terms are returned. Searches can be limited to one or a few namespaces.
Default value: *

Advanced section
-subclasses boolean
Extend the query matches to include all terms which are specialisations (EDAM
sub-classes) of the matched type. Default value: N

-obsolete boolean
The default behaviour is to not use or return obsolete terms. This option if set will
include all terms. Default value: N

Output section
-edamdef outobo

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