This is the command fastaq-interleave that can be run in the OnWorks free hosting provider using one of our multiple free online workstations such as Ubuntu Online, Fedora Online, Windows online emulator or MAC OS online emulator
PROGRAM:
NAME
fastaq_interleave - Interleaves two files, output is alternating between fwd/rev reads
DESCRIPTION
usage: fastaq_interleave <infile_1> <infile_2> <outfile>
Interleaves two files, output is alternating between fwd/rev reads
positional arguments:
infile_1
Name of first input file
infile_2
Name of second input file
outfile
Name of output file of interleaved reads
optional arguments:
-h, --help
show this help message and exit
--suffix1 SUFFIX1
Suffix to add to all names from infile_1 (if suffix not already present)
--suffix2 SUFFIX2
Suffix to add to all names from infile_2 (if suffix not already present)
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