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This is the command fastaq-make_random_contigs that can be run in the OnWorks free hosting provider using one of our multiple free online workstations such as Ubuntu Online, Fedora Online, Windows online emulator or MAC OS online emulator

PROGRAM:

NAME


fastaq_make_random_contigs - Make contigs of random sequence

DESCRIPTION


usage: fastaq_make_random_contigs [options] <contigs> <length> <outfile>

Makes a multi-FASTA file of random sequences, all of the same length. Each base has equal
chance of being A,C,G or T

positional arguments:
contigs
Nunber of contigs to make

length Length of each contig

outfile
Name of output file

optional arguments:
-h, --help
show this help message and exit

--first_number FIRST_NUMBER
If numbering the sequences, the first sequence gets this number [1]

--name_by_letters
Name the contigs A,B,C,... will start at A again if you get to Z

--prefix PREFIX
Prefix to add to start of every sequence name

--seed SEED
Seed for random number generator. Default is to use python's default

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